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1

PIWI-Interacting RNA: Its Biogenesis and Functions

Iwasaki, Yuka W., Siomi, Mikiko C., Siomi, Haruhiko

Journal:

Annual Review of Biochemistry

Year:

2015

Language:

english

File:

PDF, 1.67 MB

english, 2015

2

Roles of R2D2, a Cytoplasmic D2 Body Component, in the Endogenous siRNA Pathway in Drosophila

Nishida, Kazumichi M., Miyoshi, Keita, Ogino, Akiyo, Miyoshi, Tomohiro, Siomi, Haruhiko, Siomi, Mikiko C.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.93 MB

english, 2013

3

piRNAs derived from ancient viral processed pseudogenes as transgenerational sequence-specific immune memory in mammals

Parrish, Nicholas F., Fujino, Kan, Shiromoto, Yusuke, Iwasaki, Yuka W., Ha, Hongseok, Xing, Jinchuan, Makino, Akiko, Kuramochi-Miyagawa, Satomi, Nakano, Toru, Siomi, Haruhiko, Honda, Tomoyuki, Tomonag

Journal:

Year:

2015

Language:

english

File:

PDF, 728 KB

english, 2015

4

Differential effects on expression of IL-2 receptors (p55 and p70) by the HTLV-I pX DNA

Hisataka Sabe, Atsushi Tanaka, Haruhiko Siomi, Shigeo Koyasu, Shin Yonehara, Ichiro Yahara, Yutaka Tagaya, Katsuji Sugie, Keisuke Teshigawara, Junji Yodoi, Masakazu Hatanaka

Journal:

International Journal of Cancer

Year:

1988

Language:

english

File:

PDF, 752 KB

english, 1988

5

RNA interference: A new mechanism by which FMRP acts in the normal brain? What can Drosophila teach us?

Haruhiko Siomi, Akira Ishizuka, Mikiko C. Siomi

Journal:

Development Diabilities Research Reviews

Year:

2004

Language:

english

File:

PDF, 274 KB

english, 2004

6

A region of basic amino-acid cluster in HIV-1 Tat protein is essential forTrans-acting activity and nucleolar localization

Sei-Ichi Endo, Satoshi Kubota, Haruhiko Siomi, Akio Adachi, Stephen Oroszlan, Masatoshi Maki, Masakazu Hatanaka

Journal:

Year:

1989

Language:

english

File:

PDF, 1.24 MB

english, 1989

7

Two major subgroups of human T-Cell leukemia virus-1 in Japan

Haruhiko Siomi, Tetsuya Nosaka, Takahiko Saida, Hiroshi Miwa, Yorio Hinuma, Shigeru Shirakawa, Naoaki Miyamoto, Toshifumi Kondo, Koichi Araki, Michito Ichimaru, Akira B. Miura, Masakazu Hatanaka

Journal:

Year:

1988

Language:

english

File:

PDF, 654 KB

english, 1988

8

Augmentation of c-fosand c-junexpression in transgenic mice carrying the human T-cell leukemia virus type-Itaxgene

Yoichiro Iwakura, Mariko Tosu, Emi Yoshida, Shinobu Saijo, Junko Nakayama-Yamada, Keiko Itagaki, Masahide Asano, Haruhiko Siomi, Masakazu Hatanaka, Toshio Takeda, Tetsuo Nunoya, Susumu Ueda, Hiroshi S

Journal:

Year:

1995

Language:

english

File:

PDF, 1.58 MB

english, 1995

9

Many ways to generate microRNA-like small RNAs: non-canonical pathways for microRNA production

Keita Miyoshi, Tomohiro Miyoshi, Haruhiko Siomi

Journal:

Molecular Genetics and Genomics

Year:

2010

Language:

english

File:

PDF, 489 KB

english, 2010

10

Functional involvement of Tudor and dPRMT5 in the piRNA processing pathway in Drosophila germlines

Nishida, Kazumichi M, Okada, Tomoko N, Kawamura, Takeshi, Mituyama, Toutai, Kawamura, Yoshinori, Inagaki, Sachi, Huang, Haidong, Chen, Dahua, Kodama, Tatsuhiko, Siomi, Haruhiko

Journal:

The EMBO Journal

Year:

2009

Language:

english

File:

PDF, 1.36 MB

english, 2009

11

Overexpression of HMGA2 relates to reduction of the let-7 and its relationship to clinicopathological features in pituitary adenomas

Asa, Sylvia L, Siomi, Haruhiko, Siomi, Mikiko C, Yoshimoto, Katsuhiko, Yamada, Shozo, Wang, Elaine Lu, Rahman, Md Mustafizur, Inoue, Hiroshi, Itakura, Mitsuo, Qian, Zhi Rong

Journal:

Modern Pathology

Year:

2009

Language:

english

File:

PDF, 351 KB

english, 2009

12

Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells

Kawamura, Yoshinori, Saito, Kuniaki, Kin, Taishin, Ono, Yukiteru, Asai, Kiyoshi, Sunohara, Takafumi, Okada, Tomoko N., Siomi, Mikiko C., Siomi, Haruhiko

Journal:

Year:

2008

Language:

english

File:

PDF, 749 KB

english, 2008

13

On the road to reading the RNA-interference code

Siomi, Haruhiko, Siomi, Mikiko C.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.59 MB

english, 2009

14

A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila

Saito, Kuniaki, Inagaki, Sachi, Mituyama, Toutai, Kawamura, Yoshinori, Ono, Yukiteru, Sakota, Eri, Kotani, Hazuki, Asai, Kiyoshi, Siomi, Haruhiko, Siomi, Mikiko C.

Journal:

Year:

2009

Language:

english

File:

PDF, 849 KB

english, 2009

15

RISC hitches onto endosome trafficking

Siomi, Haruhiko, Siomi, Mikiko C

Journal:

Nature Cell Biology

Year:

2009

Language:

english

File:

PDF, 190 KB

english, 2009

16

A direct role for Hsp90 in pre-RISC formation in Drosophila

Miyoshi, Tomohiro, Takeuchi, Akiko, Siomi, Haruhiko, Siomi, Mikiko C

Journal:

Nature Structural and Molecular Biology

Year:

2010

Language:

english

File:

PDF, 458 KB

english, 2010

17

A direct role for Hsp90 in pre-RISC formation in Drosophila

Miyoshi, Tomohiro, Takeuchi, Akiko, Siomi, Haruhiko, Siomi, Mikiko C

Journal:

Nature Structural and Molecular Biology

Year:

2011

Language:

english

File:

PDF, 72 KB

english, 2011

18

Fragile X carrier screening and FMR1 allele distribution in the Japanese population

Susumu Otsuka, Yumiko Sakamoto, Haruhiko Siomi, Mituo Itakura, Kenji Yamamoto, Hideo Matumoto, Tsukasa Sasaki, Nobumasa Kato, Eiji Nanba

Journal:

Brain and Development

Year:

2010

Language:

english

File:

PDF, 126 KB

english, 2010

19

How selfish retrotransposons are silenced in Drosophila germline and somatic cells

Mikiko C. Siomi, Kuniaki Saito, Haruhiko Siomi

Journal:

Year:

2008

Language:

english

File:

PDF, 260 KB

english, 2008

20

A Role for the Drosophila Fragile X-Related Gene in Circadian Output

Shunsuke B Inoue, Masami Shimoda, Izumi Nishinokubi, Mikiko C Siomi, Miwako Okamura, Akira Nakamura, Satoru Kobayashi, Norio Ishida, Haruhiko Siomi

Journal:

Current Biology

Year:

2002

Language:

english

File:

PDF, 491 KB

english, 2002

21

Transportin: Nuclear Transport Receptor of a Novel Nuclear Protein Import Pathway

Sara Nakielny, Mikiko C Siomi, Haruhiko Siomi, W.Matthew Michael, Victoria Pollard, Gideon Dreyfuss

Journal:

Experimental Cell Research

Year:

1996

Language:

english

File:

PDF, 1.32 MB

english, 1996

22

Functional similarity of HIV-I rev and HTLV-I rex proteins: Identification of a new nucleolar-targeting signal in rev protein

Satoshi Kubota, Haruhiko Siomi, Takumi Satoh, Sei-ichi Endo, Masatoshi Maki, Masakazu Hatanaka

Journal:

Biochemical and Biophysical Research Communications

Year:

1989

Language:

english

File:

PDF, 985 KB

english, 1989

23

Analysis of a novel defective HTLV-I provirus and detection of a new HTLV-I-induced cellular transcript

Satoshi Kubota, Rika A. Furuta, Haruhiko Siomi, Masatoshi Maki, Masakazu Hatanaka

Journal:

Year:

1995

Language:

english

File:

PDF, 657 KB

english, 1995

24

Stress Signaling Etches Heritable Marks on Chromatin

Haruhiko Siomi, Mikiko C. Siomi

Journal:

Year:

2011

Language:

english

File:

PDF, 210 KB

english, 2011

25

P36. A possible link between piRNA biogenesis and microtubule organization in Drosophila ovaries

Kaoru Sato, Kazumichi M. Nishida, Mikiko C. Siomi, Haruhiko Siomi

Journal:

Differentiation

Year:

2010

Language:

english

File:

PDF, 63 KB

english, 2010

26

Interactions between transposable elements and Argonautes have (probably) been shaping the Drosophila genome throughout evolution

Haruhiko Siomi, Mikiko C Siomi

Journal:

Current Opinion in Genetics & Development

Year:

2008

Language:

english

File:

PDF, 254 KB

english, 2008

27

Gatekeepers for Piwi–piRNA complexes to enter the nucleus

Hirotsugu Ishizu, Akihiro Nagao, Haruhiko Siomi

Journal:

Current Opinion in Genetics & Development

Year:

2011

Language:

english

File:

PDF, 1.03 MB

english, 2011

28

Posttranscriptional Regulation of MicroRNA Biogenesis in Animals

Haruhiko Siomi, Mikiko C. Siomi

Journal:

Year:

2010

Language:

english

File:

PDF, 293 KB

english, 2010

29

Connection between RNA silencing and fragile X syndrome

Journal:

Neuroscience Research

Year:

2007

Language:

english

File:

PDF, 70 KB

english, 2007

30

piRNA-mediated silencing in Drosophila germlines

Mikiko C. Siomi, Tomohiro Miyoshi, Haruhiko Siomi

Journal:

Seminars in Cell & Developmental Biology

Year:

2010

Language:

english

File:

PDF, 285 KB

english, 2010

31

The dsRNA Binding Protein RDE-4 Interacts with RDE-1, DCR-1, and a DExH-Box Helicase to Direct RNAi in C. elegans

Hiroaki Tabara, Erbay Yigit, Haruhiko Siomi, Craig C. Mello

Journal:

Year:

2002

Language:

english

File:

PDF, 454 KB

english, 2002

32

RNA-binding proteins as regulators of gene expression

Haruhiko Siomi, Gideon Dreyfuss

Journal:

Current Opinion in Genetics & Development

Year:

1997

Language:

english

File:

PDF, 1.09 MB

english, 1997

33

The protein product of the fragile X gene, FMR1, has characteristics of an RNA-binding protein

Haruhiko Siomi, Mikiko C. Siomi, Robert L. Nussbaum, Gideon Dreyfuss

Journal:

Year:

1993

Language:

english

File:

PDF, 2.36 MB

english, 1993

34

Essential role for KH domains in RNA binding: Impaired RNA binding by a mutation in the KH domain of FMR1 that causes fragile X syndrome

Haruhiko Siomi, Mleyoung Choi, Mikiko C. Siomi, Robert L. Nussbaum, Gideon Dreyfuss

Journal:

Year:

1994

Language:

english

File:

PDF, 1.34 MB

english, 1994

35

Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila

Cernilogar, Filippo M., Onorati, Maria Cristina, Kothe, Greg O., Burroughs, A. Maxwell, Parsi, Krishna Mohan, Breiling, Achim, Sardo, Federica Lo, Saxena, Alka, Miyoshi, Keita, Siomi, Haruhiko, Siomi,

Journal:

Year:

2011

Language:

english

File:

PDF, 801 KB

english, 2011

36

Sequence requirements for nucleolar localization of human T cell leukemia virus type I pX protein, which regulates viral RNA processing

Siomi, Haruhiko, Shida, Hisatoshi, Nam, Seok Hyun, Nosaka, Tetsuya, Maki, Masatoshi, Hatanaka, Masakazu

Journal:

Year:

1988

Language:

english

File:

PDF, 11.45 MB

english, 1988

37

Nucleolar Targeting Signal of Human T-Cell Leukemia Virus Type I rex-Encoded Protein is Essential for Cytoplasmic Accumulation of Unspliced Viral mRNA

Tetsuya Nosaka, Haruhiko Siomi, Yoshifumi Adachi, Makoto Ishibashi, Satoshi Kubota, Masatoshi Maki and Masakazu Hatanaka

Journal:

Proceedings of the National Academy of Sciences

Year:

1989

Language:

english

File:

PDF, 1.51 MB

english, 1989

38

A Nuclear Localization Domain in the hnRNP A1 Protein

Haruhiko Siomi and Gideon Dreyfuss

Journal:

The Journal of Cell Biology

Year:

1995

Language:

english

File:

PDF, 3.91 MB

english, 1995

39

Yb Integrates piRNA Intermediates and Processing Factors into Perinuclear Bodies to Enhance piRISC Assembly

Murota, Yukiko, Ishizu, Hirotsugu, Nakagawa, Shinichi, Iwasaki, Yuka W., Shibata, Shinsuke, Kamatani, Miharu K., Saito, Kuniaki, Okano, Hideyuki, Siomi, Haruhiko, Siomi, Mikiko C.

Journal:

Year:

2014

Language:

english

File:

PDF, 2.31 MB

english, 2014

40

piRNA clusters and open chromatin structure

Soichiro Yamanaka,Mikiko C Siomi,Haruhiko Siomi

Journal:

Year:

2014

Language:

english

File:

PDF, 985 KB

english, 2014

41

Circadian Phenotypes of Drosophila Fragile X Mutants in Alternative Genetic Backgrounds

Sekine, Tatsumori, Yamaguchi, Terumi, Hamano, Kunikatsu, Siomi, Haruhiko, Saez, Lino, Ishida, Norio, Shimoda, Masami

Journal:

Zoological Science

Year:

2008

Language:

english

File:

PDF, 1.14 MB

english, 2008

42

Is canalization more than just a beautiful idea?

Kaoru Sato,Haruhiko Siomi

Journal:

Year:

2010

Language:

english

File:

PDF, 811 KB

english, 2010

43

Ran-regulated interactions of nuclear import and export receptors with nucleoporins

Nakielny, Sara, Kataoka, Naoyuki, Siomi, Haruhiko, Wan, Lili, Siomi, Mikiko, Dreyfuss, Gideon

Journal:

Biochemistry and Cell Biology

Year:

1999

Language:

english

File:

PDF, 234 KB

english, 1999

44

miRNA Regulatory Ecosystem in Early Development

Iwasaki, Yuka W., Siomi, Haruhiko

Journal:

Year:

2014

Language:

english

File:

PDF, 327 KB

english, 2014

45

Gene expression ontogeny of spermatogenesis in the marmoset uncovers primate characteristics during testicular development

Lin, Zachary Yu-Ching, Hirano, Takamasa, Shibata, Shinsuke, Seki, Naomi M., Kitajima, Ryunosuke, Sedohara, Ayako, Siomi, Mikiko C., Sasaki, Erika, Siomi, Haruhiko, Imamura, Masanori, Okano, Hideyuki

Journal:

Developmental Biology

Year:

2015

Language:

english

File:

PDF, 13.30 MB

english, 2015

46

Small RNAs: Artificial piRNAs for Transcriptional Silencing

Hirano, Takamasa, Siomi, Haruhiko

Journal:

Current Biology

Year:

2015

Language:

english

File:

PDF, 362 KB

english, 2015

47

The pre-mRNA binding K protein contains a novel evolutionary conserved motif

Siomi, Haruhiko, Matunis, Michael J., Michael, W. Matthew, Dreyfuss, Gideon

Journal:

Nucleic Acids Research

Year:

1993

Language:

english

File:

PDF, 6.54 MB

english, 1993

48

Crystal Structure and Activity of the Endoribonuclease Domain of the piRNA Pathway Factor Maelstrom

Matsumoto, Naoki, Sato, Kaoru, Nishimasu, Hiroshi, Namba, Yurika, Miyakubi, Kana, Dohmae, Naoshi, Ishitani, Ryuichiro, Siomi, Haruhiko, Siomi, Mikiko C., Nureki, Osamu

Journal:

Year:

2015

Language:

english

File:

PDF, 3.44 MB

english, 2015

49

Krimper Enforces an Antisense Bias on piRNA Pools by Binding AGO3 in the Drosophila Germline

Sato, Kaoru, Iwasaki, Yuka W., Shibuya, Aoi, Carninci, Piero, Tsuchizawa, Yuuta, Ishizu, Hirotsugu, Siomi, Mikiko C., Siomi, Haruhiko

Journal:

Year:

2015

Language:

english

File:

PDF, 2.85 MB

english, 2015

50

diRNA-Ago2-RAD51 complexes at double-strand break sites

Yamanaka, Soichiro, Siomi, Haruhiko

Journal:

Year:

2014

Language:

english

File:

PDF, 322 KB

english, 2014